[Chimera-users] SEQRES not read properly?
a01406823 at unet.univie.ac.at
Wed Jul 24 05:04:27 PDT 2019
I combined a PDB file from three chains to single chain format. In
between those chains are TER. Now i need to add missing residues as
SEQRES. I added them all properly, all atoms are named properly but
chimera detects a missing residue at last position instead of the first
position of chain B making the whole sequence shift for 1 nucleic acid
residue to the left. Pymol, which does not read SEQRES, registers all
missing residues as blanks and their positions are 100% correct (checked
3 times). SEQRES was copied from the three-chain PDB file and edited to
resemble a single chain file (C and E were renamed to A, SEQRES
numbering was continued uninterrupted). How does chimera read SEQRES?
Here is the full pdb file in gist:
Thanks in forwards,
More information about the Chimera-users