[Chimera-users] Output of distance measurements

Eric Pettersen pett at cgl.ucsf.edu
Thu Jan 11 11:23:35 PST 2018

To use Elaine’s suggestion you have to use the Save button on the Reply Log, not the Save button on the Distances dialog.  The only way to get blanks lines in that is to change Chimera’s Python code.


	Eric Pettersen
	UCSF Computer Graphics Lab

> On Jan 11, 2018, at 10:07 AM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> Hi Marco,
> If you put the command
> echo
> between the distance commands, it will put a blank line in the Log. It worked when I tried it, at least!
> Best,
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>> On Jan 11, 2018, at 2:17 AM, Marco Sette <sette at uniroma2.it> wrote:
>> Dear all,
>> I have a very primitive script to measure distances, like
>> distance :1.a at ha :5.b at ha
>> distance :1.a at ha :4.b at ha
>> distance ....
>> etc.
>> I run the script in File --> Open and get the distances in the Structure Measurements panel and then Save.
>> The output file list all the distances but, for my analysis, it would be better to keep the lines separated by a blank line, or something like this.
>> Maybe this is possible by some change in my primtive script but I have no idea...
>> Thanks for your help,
>> Marco
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