[Chimera-users] MMTK/Chimera interface error

ADIL AHIRI ahiri.adil at gmail.com
Sun Feb 26 13:07:40 PST 2017

hi everyone,

I work on the modeling of the effect of phosphorylation on segment peptide.

I had a problem when i use this interface MMTK/Chimera interface because
when i use a doubly phosphorylated peptide i have this message:

KeyError: 'No parameters for bond Atom 0.ARG_12__0_0_1_286__B.peptide.C
(atom type C) - Atom 0.TPO_13__0_0_1_287__B.N (atom type n)'

You will find attached a sample problem source file.

Is there anyone who can help me solve this problem please.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20170226/175470ad/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: 1OL7L.pdb
Type: chemical/x-pdb
Size: 60466 bytes
Desc: not available
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20170226/175470ad/attachment.bin>

More information about the Chimera-users mailing list