[Chimera-users] Joining models question
Kyle J. Lauersen
kyle.lauersen at uni-bielefeld.de
Fri Jan 29 11:56:21 PST 2016
I was omitting the .A. Since they only had one chain I didn't think it was required. But it's working now.
Dr. Kyle J. Lauersen
Algae Biotechnology & Bioenergy
Center for Biotechnology
p: +49 (0) 521 106 12261
e: kyle.lauersen at uni-bielefeld.de
> On 29.01.2016, at 20:43, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> Hi Kyle,
> The following works for me:
> I opened YFP and PcPs in that order, then:
> disp @n,ca,c
> sel #1:559.a at C #0:2.a at N
> menu: Tools….Structure Editing… Build Structure, change to Join Models section of the resulting dialog.
> Then I chose the “C-N peptide bond” option and clicked Apply, and the join appears to take place successfully.
> However, I see your point that something weird is going on: I repeated the process several times, and sometimes (but not always!!) if I didn’t change from ribbon to atom display, the Apply button was grayed out. We should look into why that is happening.
> I hope this helps,
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>> On Jan 29, 2016, at 5:33 AM, Kyle J. Lauersen <kyle.lauersen at uni-bielefeld.de> wrote:
>> I am trying to join the two models attached to this sequence.
>> I have used the sequence selection code in atom specifier: #1:559.a at C #0:2.a at N
>> Where model #0 is YFP and #1 is PcPs.
>> When I go to join models, the Apply button is not accessible.
>> Can you indicate if I am doing something incorrect in the selection of the C and N atoms?
>> Thank you for your time.
>> Dr. Kyle J. Lauersen
>> Algae Biotechnology & Bioenergy
>> Center for Biotechnology
>> Bielefeld University
>> p: +49 (0) 521 106 12289
>> e: kyle.lauersen at uni-bielefeld.de
>> Chimera-users mailing list
>> Chimera-users at cgl.ucsf.edu
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