[Chimera-users] ViewDock

leila karami karami.leila1 at gmail.com
Tue Jun 23 12:44:39 PDT 2015

Dear chimera users

I have docking outputs from Swissdock (there is 252 binding modes for my
ligand relative to the target protein). I used following to view my outputs:

1) File > Open , then load target.pdb
2) Tools > Surface/Binding Analysis > ViewDock, choose clusters.dock4.pdb
(Dock 4, 5 or 6 format)

Now, I want to have several pdb files in which there is target protein and
each of binding modes, that is 252 pdb files. How to do this?

Any help will highly appreciated.
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