[Chimera-users] Color surfaces
Hernando J Sosa
hernando.sosa at einstein.yu.edu
Tue Jan 8 15:23:35 PST 2013
Thanks Elaine that works, However I had a hard time setting the transparency. I tried selecting the atoms opacity colors but I didn't manage to made the surface transparent (neither the atoms).
From: Elaine Meng [mailto:meng at cgl.ucsf.edu]
Sent: Tuesday, January 08, 2013 1:11 PM
To: Hernando J Sosa
Cc: chimera-users at cgl.ucsf.edu
Subject: Re: [Chimera-users] Color surfaces
You can do it with Color Zone (in menu under Tools...Volume Data, also in Volume Viewer "Tools" menu). This colors surfaces to match nearby selected atoms or markers:
I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab Department of Pharmaceutical Chemistry University of California, San Francisco
On Jan 8, 2013, at 9:48 AM, Hernando J Sosa wrote:
> I thought there is was way to color density surfaces according to the assigned color of atoms close by (i.e. when there is an a atomic structure fitted into the density), but I can't remember if this was indeed possible or how to do it. Is there a way to do this ?
More information about the Chimera-users