[Chimera-users] Chimera-users Digest, Vol 114, Issue 2

Pu Qian p.qian at sheffield.ac.uk
Wed Oct 3 14:29:08 PDT 2012


I'm working on a big protein complex with MW ~500 kD. It contains a cave
inside of the protein. Now I would like to high light this cave so that I
can show the room that is big enough for a quinone molecule to move.
Question is: is there a function in Chimera which allows users to produce
such cave inside of the protein based on PDB file of the protein. If is,
where can I find it and how to use it. It would be a great appreciated if
anyone here could give me advices. Thanks.

Best regards

Dr. Pu Qian
Department of Molecular Biology
The University of Sheffield
Sheffield, S10 2TN
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