[Chimera-users] Cavities/Pockets

George Tzotzos gtzotzos at me.com
Sat Oct 22 07:49:36 PDT 2011

I'm wondering if there's a way to work out the relative hydrophobicity of pockets/cavities of related receptors. Fetching CASTp IDs and rendering the surfaces of the cavities gives a crude idea of hydrophobicity of a given cavity. However, I'm looking for something that goes beyond visualisation.

Any ideas would be most welcome.

Best regards


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