[Chimera-users] Query regarding Ksdssp assignment

Arun Prasad Pandurangan a.pandurangan at mail.cryst.bbk.ac.uk
Thu Jul 14 08:52:23 PDT 2011

Dear Users and Developers,

I would like to know whether its possible to retrieve the full secondary 
structural assignment using Ksdssp within Chimera. For instance, I would 
like to know all the strands that belong to a beta sheet. If I am right, 
running Ksdssp from Chimera only gives details of the strand (using 
isStrand) and helix (using isHelix) assignment and not about sheet 
information. Using the full output of an another program DSSP, I am able 
deduce which strands belongs to which sheets. I would like to know 
whether similar kind of detailed output is available from Ksdssp as 
well. If so how to retrieve those information within Chimera?

Looking forward for the advices. Thank you.

with best regards,
Arun Prasad

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