[Chimera-users] Getting an extension handle
cmoad at indiana.edu
Mon Feb 7 10:16:14 PST 2005
Elaine Meng wrote:
>>How would I get get a handle on a running instance of an extension?
>>Specifically, I want to be able to associate my own structures to
>>sequences in the MultAlignViewer.
> Hi Charlie,
> If I understand you correctly, this is something you
> can do this in the user interface (without dealing with code).
> Your structures should automatically associate with the
> sequences when opened in Chimera, if the structure's sequence
> and the sequence in the alignment match well enough. Even
> if they don't, you can "force" the structure to associate
> using Multalign Viewer's menu option
> Structure... Associations
> This option brings up a dialog in which you can specify
> which of the structures open in Chimera should be
> associated with a sequence in the alignment.
I am working on a plugin so I do want to be able to do this
programatically. Thanks for the hint on the auto-association. The
problem I have now is matching too well. Both sequences are matching
the second model loaded. I see I can fix this in the interface, but any
clue on how to access this for scripting?
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