# Amino acid hydrophobicity scale from # "An amino acid "transmembrane tendency" scale that approaches the # theoretical limit to accuracy for prediction of transmembrane helices: # relationship to biological hydrophobicity," # Zhao and London, Protein Sci 15:8 (2006), doi: 10.1110/ps.062286306. # # Zero should be at the middle of the extents (-3.46+1.98)/2 = -0.74 # # More positive means more hydrophobic. # # Use this file to assign the attribute in Chimera with the # Define Attribute tool or the command defattr. # # attribute: ttHydrophobicity recipient: residues :asp -3.27 :glu -2.90 :asn -1.62 :gln -1.84 :lys -3.46 :arg -2.57 :his -1.44 :gly -0.19 :pro -1.44 :ser -0.53 :thr -0.32 :cys -0.30 :met 1.40 :ala 0.38 :val 1.46 :ile 1.97 :leu 1.82 :phe 1.98 :trp 1.53 :tyr 0.49