Chimera Commands Index

( colordef | colourdef ) color_name red green blue [ alpha ]

( colordef | colourdef ) color_name existing_color_name

Colordef can be used to define a new color (when color_name does not already exist) or to change the definition of an existing color (when color_name is one of the built-in color names or a name defined previously with colordef). While both color_name and existing_color_name can contain letters, digits, and underscores, only existing_color_name can contain spaces. The existing_color_name can be any color name that specifies a single color. Caution is warranted in redefining existing colors, because the results can be confusing. For example, "black" can be redefined to indicate a color that is not actually black.

The red, green, blue, and alpha arguments must be floating point numbers between zero and one, inclusive. The alpha value denotes transparency, where 0.0 means completely transparent (invisible) and 1.0 means completely opaque (the default).

Example Color Definitions
color name red green blue
red 1.0 0.0 0.0
green 0.0 1.0 0.0
blue 0.0 0.0 1.0
cyan 0.0 1.0 1.0
magenta 1.0 0.0 1.0
yellow 1.0 1.0 0.0
white 1.0 1.0 1.0
black 0.0 0.0 0.0


colordef lilac 0.5 0.5 1.0
- create a color named lilac
colordef activesite red
- create a color named activesite which is actually red

Colorpanel, fromeditor, and editor are special color names that indicate the current Color Editor color. Colordef can be used to save the current Color Editor color to a name before the color is changed, for example:

colordef myblue colorpanel

Although color definitions and aliases are saved in sessions, placing such commands in a midasrc file is the most convenient way to apply them each time Chimera is used. A midasrc file is simply a command file that is executed automatically when the Command Line is started (see the Midas preferences).

See also: color, bondcolor, ribcolor, modelcolor, rangecolor, the Color Editor