Transform Molecule Coordinates

Transform Molecule Coordinates applies a rotation and translation to a molecule model or marker set.

There are several ways to start Transform Molecule Coordinates, a tool in the Movement category.

The Molecule should be chosen from the list of open molecule models. Its transformation is specified with:

• Euler angles [φ θ ψ] - rotations defined by the χ-convention, where the first rotation is by an angle φ about the Z-axis, the second is by an angle θ (potentially ranging from 0 to π) about the new X-axis, and the third is by an angle ψ about the new Z-axis.
  
  
• Shift [X Y Z] - translations along X, Y, and Z