HappyDoc Generated Documentation ./WriteMol2

. / WriteMol2 

Functions   
  writeMol2 
writeMol2 (
        models,
        fileName,
        status=None,
        anchor=None,
        relModel=None,
        hydNamingStyle="sybyl",
        multimodelHandling="individual",
        gaffType=False,
        )

Write a Mol2 file.

models are the models to write out into a file named fileName.

status, if not None, is a function that takes a string
used to report the progress of the write.

anchor is a selection (i.e. instance of a subclass of chimera.selection.Selection) containing atoms/bonds that should be written out to the @SETS section of the file as the rigid framework for flexible ligand docking.

hydNamingStyle controls whether hydrogen names should be "Sybyl-like" (value: sybyl) or "PDB-like" (value: pdb) -- e.g. HG21 vs. 1HG2.

multimodelHandling controls whether multiple models will be combined into a single @MOLECULE section (value: combined) or each given its own section (value: individual).

Classes   
Python files   

ChimeraExtension.py

gui.py

dialog for writing models as Mol2 files


This document was automatically generated Thu Nov 15 14:09:24 2007 by HappyDoc version 3.0.a1