HappyDoc Generated Documentation ./NucleicAcids

. / NucleicAcids 

Functions   
  fillSugarRings 
fillSugarRings ( residues )
  getRing 
getRing ( r,  baseRing )

Return atoms in nucleotide residue named by baseRing.

All of the atoms must be present and displayed.

  drawCylinder 
drawCylinder (
        radius,
        ep0,
        ep1,
        **kw,
        )
  bondsBetween 
bondsBetween ( atoms )
  fill5Ring 
fill5Ring ( atoms,  c5p=None )
  sugarTube 
sugarTube ( residues )
  slabNodes 
slabNodes (
        residues,
        style="big",
        thickness=0.5,
        orient=True,
        shape='box',
        sugarTube=False,
        )
  fillBaseRings 
fillBaseRings ( residues,  orient=True )
  drawSlab 
drawSlab (
        residue,
        style,
        thickness,
        orient,
        shape,
        sugarTube,
        )
  color_keywords 
color_keywords ( atom )
  nodesToVRML 
nodesToVRML ( nodes )
  skipNonStandardResidue 
skipNonStandardResidue ( r )
  fillPlanarRing 
fillPlanarRing (
        atoms,
        ringIndices=[],
        convex=True,
        )
Classes   

TriangleNode

Python files   

ChimeraExtension.py

gui.py


This document was automatically generated Thu Nov 15 14:08:47 2007 by HappyDoc version 3.0.a1