Basic Functions Index

Commands

[Full-Page Index]

2dlabels ac addaa addcharge addh alias align angle bond bondcolor bonddisplay bondrepr bondzone brotation cd center chain chirality clip close cofr color colordef combine conic copy crystalcontacts defattr delete display distance echo export findclash findhbond focus freeze getcrd hbonds help hkcage intersurf ksdssp label labelopt linewidth load longbond mask match matchmaker matrixcopy matrixget matrixset mclip meshmol minimize mmaker modelcolor modeldisplay molmap morph move movie msc msms namesel neon objdisplay open pdbrun perframe pop preset push rainbow rangecolor read represent reset ribbackbone ribbon ribcolor ribinsidecolor ribrepr ribscale rlabel rmsd rock roll rotation save savepos scale section select set/unset setattr shape show sleep solvate source split start stereo stop surface surfcat surfcolor surfrepr surftransparency swapaa swapna sym system tcolor texture topography thickness turn vdw vdwdefine vdwdensity version viewdock volume vop wait window windowsize write writesel x3dsave

Atom Specification

Command Files

Chimera Quick Ref (PDF)

Unsupported Midas Commands