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/ . / VolumeData / mrc / mrc_format.py / MRC_Data
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Methods
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matrix
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matrix ( self )
Returns 3D Numeric matrix with zyx index order.
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read_values
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read_values (
self,
file,
etype,
count,
)
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submatrix
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submatrix (
self,
ijk_origin,
ijk_size,
)
Reads a submatrix from a potentially very large file.
Returns 3D Numeric matrix with zyx index order.
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check_header_values
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check_header_values (
self,
v,
file_size,
file,
)
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Exceptions
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SyntaxError, ( 'MRC data value type (%d) ' % v [ 'mode' ] + 'is not 8 or 16 bit integers or 32 bit floats' )
SyntaxError, ('File size %d too small for grid size (%d,%d,%d)' %(file_size, v [ 'nc' ], v [ 'nr' ], v [ 'ns' ] ) )
SyntaxError, ('Bad MRC grid size (%d,%d,%d)' %(v [ 'nc' ], v [ 'nr' ], v [ 'ns' ] ) )
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permute_matrix_to_xyz_axis_order
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permute_matrix_to_xyz_axis_order ( self, matrix )
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read_header_values
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read_header_values ( self, file )
Format derived from C header file mrc.h.
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__init__
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__init__ ( self, path )
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read_values_from_string
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read_values_from_string (
self,
string,
etype,
count,
)
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