[Chimera-users] Query (how to find H-bonds)

Gurudeeban Selvaraj gurudeeb99 at qq.com
Sat Sep 30 04:57:50 PDT 2017


Dear Dr.Elaine,


          Thanks for the information. It is working now but some of them I could not see hydrogen bonds (Intra). Now I could not see the ligand structure of the docked result in Chimera. 


I have enclosed file and snap shot of my issue. Let me know, what will do?


------------------
 Sincerely
 Dr. Gurudeeban Selvaraj, Ph.D.
Postdoctoral Researcher
Center for Food Science and Technology
School of Chemical Engineering and Environment 
 Henan University of Technology, Zhengzhou, China
 Mobile: +86 1883 800 2927; +91 84890 55578  
ORCID:http://orcid.org/0000-0002-7223-3853

 Residence: Room No. 503, Foreign Teacher's Apartment, University Garden, Lianhua Street No. 50, Hi-Tech development Zone, Zhengzhou, 450001, China
 




 




------------------ Original ------------------
From:  "Elaine Meng";<meng at cgl.ucsf.edu>;
Send time: Friday, Sep 29, 2017 5:06 AM
To: "Gurudeeban Selvaraj"<gurudeeb99 at qq.com>; 
Cc: "UCSF Chimera Mailing List"<chimera-users at cgl.ucsf.edu>; 
Subject:  Re: [Chimera-users] Query (how to find H-bonds)




> On Sep 28, 2017, at 1:54 PM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Many orange lines are drawn on the structure to show the H-bonds. 

One minor correction:  for you, the lines will be whatever color is shown in the square color well near the top of the H-bond dialog… the default is a bright blue color similar to cyan.

Elaine
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