[Chimera-users] Axes/Planes/Centroids for the OPM membrane visualization

James Starlight jmsstarlight at gmail.com
Tue Oct 31 10:27:38 PDT 2017


Dear Chimera Users,

I have a question regarding Axes/Planes/Centroids for the
visualization of the membrane plane predicted by OPM.

Firstly, I have uploaded my structure with DUM atoms. Than, I selected
the DUM atoms in both layers and try to show the membrane plane via
defining of a plane for it. As the result, a cylindrical surface
oriented perpendicular to the imaginative membrane has been emerged.
What should I change in options to obtain it aligned along the
membrane normal in a correct way? Is it possible to make more flexible
selection of the DUM atoms only in the selected layer?

Thank you for the help!

Gleb


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