[Chimera-users] Match->Align commandline

sonal rashmi me.sr1510 at gmail.com
Thu Aug 10 06:35:36 PDT 2017


sir/mam,
i want to use chimera Match->Align feature using the commandline or nogui
script (python) to align multiple protein sequences (pdb files) to generate
the alignment on MultiAlignViewer and save it as clustal (.aln) file.
I tried out the python codes posted on the portals but non of them are
giving proper alignment.
kindly advice as to what i can do? Is there any commandline available for
it?
Thanking You
Sincere User
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