[Chimera-users] How to install package in chimera python?

hy liao hl_random at yahoo.com
Wed Apr 19 06:52:21 PDT 2017


OK, thank you, Eric! 

    On Thursday, April 13, 2017 2:03 PM, Eric Pettersen <pett at cgl.ucsf.edu> wrote:
 

 It seems that you have the IDLE shell set to autostart, which unsurprisingly fails in nogui mode.  It’s harmless — you can ignore it.
—Eric

On Apr 12, 2017, at 2:30 PM, hy liao <hl_random at yahoo.com> wrote:
Thank you, Eric! but I get this error, will it cause later malfunctions?
> chimera/bin/chimera --nogui --script "chimera/bin/pip install scipy"
Starting extension 'IDLE' failed (and then blah...)
Thanks again,SL

 

    On Tuesday, April 11, 2017 1:28 PM, Eric Pettersen <pett at cgl.ucsf.edu> wrote:
 

 You type that to the Unix shell, the same way you started Chimera.  So:
 <whatever command you use to start Chimera>  --nogui --script get-pip.py
—Eric
 Eric Pettersen UCSF Computer Graphics Lab


On Apr 10, 2017, at 6:23 PM, hy liao <hl_random at yahoo.com> wrote:
Hi, this was posted here, but where exactly do I invoke the said chimera command? I open chimera with IDLE; a python shell opens with the following
Python 2.7.10 (default, May  4 2016, 01:09:35) [GCC 4.6.2] on linux2Type "copyright", "credits" or "license()" for more information.==== No Subprocess ====>>> >>> import chimera>>>
I tried what the posting said, but got an error>>> chimera --nogui --script get-pip.pyTraceback (most recent call last):
  File "<pyshell#3>", line 1, in <module>   chimera --nogui --script get-pip.pyNameError: name 'nogui' is not defined
Thanks,SL



[Chimera-users] How to install package in chimera python?

  
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[Chimera-users] How to install package in chimera python?
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