[Chimera-users] (no subject)

Elaine Meng meng at cgl.ucsf.edu
Mon Apr 3 13:13:42 PDT 2017


Matchmaker does not calculate the axis of symmetry, it superimposes the chains that you tell it to superimpose, as described in the link I sent earler. Then measure rotation figures out the axis and angle relationship between the two copies, also as described.
Elaine

> On Apr 3, 2017, at 1:03 PM, Kavya Shankar <kavshank at umail.iu.edu> wrote:
> 
> Hi,
> 
> I learnt that a dimer axis of symmetry is got by using matchmaker and then the rotation is measured from it. I would like to know the algorithm that is used to calculate the axis of symmetry and how exactly it is done if possible.
> 
> Thank you.
> 
> Regards,
> Kavya Shankar




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