[Chimera-users] Reflection symmetric

Grzegorz Bokota g.bokota at cent.uw.edu.pl
Tue Nov 22 04:18:55 PST 2016

Thanks for your response. I need some time to check it. I see thet it is
realized by reversing volumetric data in z-dimesion and recalculating
rotation axis and angel. it is impossible to be done by some parameters?

Grzegorz Bokota

2016-11-09 19:33 GMT+01:00 Elaine Meng <meng at cgl.ucsf.edu>:

> Hi Grzegorz,
> I’m not sure if this is exactly what you mean, but when the data has been
> opened in Chimera you can use the “vop zflip” command to create a new data
> set with the Z planes in the opposite order:
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/vop.html#zFlip>
> Best,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> On Nov 8, 2016, at 9:35 AM, Grzegorz Bokota <g.bokota at cent.uw.edu.pl>
> wrote:
> > Hi,
> > I need to apply isometry and shift to volume data. In cmap file format
> it is possible to do rotation
> > but to have isometry I need to can do symmetric reflection. Ir is
> possible with any chimera format?
> > I found that there is "symmetries" parameter in cmap file format, but i
> do not seen any effect.
> >
> > Sincerely,
> > Grzegorz Bokota
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