[Chimera-users] Ribbon outline

George Tzotzos gtzotzos at me.com
Mon Nov 14 10:28:54 PST 2016


Many thanks Elaine, much appreciated

George

> On 14 Nov 2016, at 19:00, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> 
> Hi George,
> You can turn off the black outlines (but it will turn it off for everything, not just the ribbons) with:
> 
> ~set silhouette
> 
> I don’t know where you got those grid lines. If it is a density map or occupancy map contour surface, you can use the Volume Viewer dialog (in menu under Tools… Volume Data).  In that dialog, you can change color by clicking the square color well under the histogram and using the Color Editor. You can make the mesh less dense by increasing the “step” value above the histogram.  For line thickness or making a more dense mesh, In the Volume Viewer dialog’s menu, show options with Features… Surface and Mesh options.  Then the dialog will contain mesh line thickness, whether you want square mesh, etc.  To get a denser mesh, use the “Subdivide surface” option.
> 
> <http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/volumeviewer/framevolumeviewer.html>
> <http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/volumeviewer/volumeviewer.html#dispsurf>
> 
> I hope this helps,
> Elaine
> ----------
> Elaine C. Meng, Ph.D. 
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
>> On Nov 14, 2016, at 8:44 AM, George Tzotzos <gtzotzos at me.com> wrote:
>> 
>> I’m attaching an image generated with Chimera for easy reference.
>> The image was generated using the following commands
>> 
>> colordef transblue 0 0 1 .2
>> color transblue,r :1-125
>> 
>> I’m looking for ways to remove the ribbon black outline which somehow I generated inadvertently. 
>> I’m also looking for ways to either (a) change the color of the grid lines or (b) the density of grid lines 
>> Any help would be greatly appreciated
>> Regards
>> George
>> <Figure11.png>
> 




More information about the Chimera-users mailing list