[Chimera-users] Reflection symmetric

Elaine Meng meng at cgl.ucsf.edu
Wed Nov 9 10:33:33 PST 2016


Hi Grzegorz,
I’m not sure if this is exactly what you mean, but when the data has been opened in Chimera you can use the “vop zflip” command to create a new data set with the Z planes in the opposite order:

<http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/vop.html#zFlip>

Best,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Nov 8, 2016, at 9:35 AM, Grzegorz Bokota <g.bokota at cent.uw.edu.pl> wrote:

> Hi,
> I need to apply isometry and shift to volume data. In cmap file format it is possible to do rotation 
> but to have isometry I need to can do symmetric reflection. Ir is possible with any chimera format?
> I found that there is "symmetries" parameter in cmap file format, but i do not seen any effect. 
> 
> Sincerely, 
> Grzegorz Bokota



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