[Chimera-users] Long-ranged electrostatics analysis

Elaine Meng meng at cgl.ucsf.edu
Wed May 25 09:56:22 PDT 2016


Hi Gleb,
I’m not aware of any electrostatics features or plugins other than already mentioned (Coulombic, Poisson-Boltzmann).   Also it is not clear exactly what kind of calculation you are looking for, but I guess we can see if any other users have ideas.
Best,
Elaine 
-----
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco


On May 24, 2016, at 9:54 AM, James Starlight <jmsstarlight at gmail.com> wrote:

> Dear Chimera users!
> 
> I am analysing several snapshots etracted from the full atomistic md
> simulation of protein-protein assosiation.
> I wounder to ask what are the Chiemra plugins might be useful to study
> long-rang electrostatic effect mediated initial recognition of both
> proteins in this system besides APBS caclucation which is more focused
> on short-ranged electrostatics.
> 
> Thanks for help!
> 
> Gleb




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