[Chimera-users] about "adjust angle" command

Elaine Meng meng at cgl.ucsf.edu
Thu Jun 30 09:49:29 PDT 2016


Hi,
About the first thing: it probably shouldn’t be so picky, but it works if you remove the spaces in the atomspec, i.e.:

adjust angle 90 #0:4 at C#0:5 at C#0:6 at C

Also there is only one atom per residue, so you could simplify to

adjust angle 90 #0:4-6

Best,
Elaine
----------
Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jun 30, 2016, at 1:44 AM, Jiying Jia <jiajiyingxibei at gmail.com> wrote:
> Hi, 
> I'm trying to use chimera to adjust angles in my polymer.
> First: Probably I found a bug: when I typed "adjust angle 90 #0:4 at C #0:5 at C #0:6 at C" in the command line, it reported that "the degree should be a number". After I changed line 488 in /Chimera/share/Midas/midas_text.py to "degrees, spec = args.split(None,1)", the command works.




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