[Chimera-users] A question about subunit chain-letter ID.
ignatiou at gmail.com
Thu Jun 23 04:36:45 PDT 2016
thank you for the advice..
its works now.
On Wed, Jun 22, 2016 at 9:21 PM, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> On Jun 22, 2016, at 1:14 PM, T-I <ignatiou at gmail.com> wrote:
> > Dear Elaine,
> > I'm a student from London and I have a quick question for you.
> > I have a single pdb file consisting of 7 separate subunit chains (with
> TER between each chain).
> > I would like to know how to assign an identifying chain letter to each
> of those subunit chains (i.e, from A to G).without having to manually copy
> and paste columns of chain letters into the pdb text file.
> > This way when i scroll over each pdb chain in Chimera i will be able to
> see the chain letter too.
> > Can this chain letter ID assignment be done directly in Chimera?.....
> and if so, how and which tool do i need to use.?
> > Thank you for your assistance.
> > Ti
> Dear Ti,
> I think you can use the “Change Chain IDs” tool (in menu under Tools…
> Structure Editing). If I recall correctly, even though you don’t already
> have chain IDs, the parts separated by TER will be listed separately in the
> dialog and you can specify a new ID for each.
> There is also a “changechains” to do basically the same thing, but it only
> handles chains that already have IDs that are different from each other.
> I hope this helps,
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> P.S. we generally recommend sending questions to the chimera-users list,
> CC’d here
-------------- next part --------------
An HTML attachment was scrubbed...
More information about the Chimera-users