[Chimera-users] Saving Attribute settings and Worm Radius Consistency

Nicole Persky persky at broadinstitute.org
Mon Jul 25 14:24:19 PDT 2016


Hi All,
I've started using Chimera to map two different datasets onto structures.
For one, we use color, and for the other we use worm radius.
I've encountered two problems while trying to make figures for publications:

1- when I save my session the image is saved but when I go to "render by
attribute" to tweak the settings a little, the threshholds under colors and
worm radius have been reset.
How to I get them not to reset, but to keep the thresholds?

2- I am trying to compare three different images with the same worm radius
thresholds.
For one of the images the lowest number of my attribute is LARGER than the
lowest number I want to define on my threshhold (I would like to set the
lower worm radius to 1 for a value of 1 however for this dataset my lowest
value is 2. I cannot just set the value starting at 2 because there is a
gradient to the largest value that gets thrown off). Yet, I cannot set the
threshold lower than the lowest value of my attribute. Does anyone know a
way around this?

thanks so much,
Sincerely,
Nicky
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