[Chimera-users] Visulaizing maps from COOT in Chimera

Cedric Govaerts cgovaert at ulb.ac.be
Mon Jul 4 06:11:56 PDT 2016


Hi all,

I would like to use Chimera to show a 2FO-FC or FO-FC electron density 
map (actually a tiny part of it)  obtained from COOT (or directly from 
the refinement program).

If I open both the PDB file and the .map file, they are correctly open 
except that the bounding box from chimera truncate the map way to early.

That's because my PDB absolute coordinate sit in the origin and it seem 
I cannot use negative value for the boundaries of the volume/map.

How can I get the map to extend entirely over my protein ?


Thanks !


Cedric


-- 
Cedric Govaerts, Ph.D.
Universite Libre de Bruxelles
Campus Plaine. Phone :+32 2 650 53 77
Building BC, Room 1C4 203
Boulevard du Triomphe, Acces 2
1050 Brussels
Belgium
http://govaertslab.ulb.ac.be/
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