[Chimera-users] Showing color key programatically colouring from a volume...

Pablo Conesa pconesa at cnb.csic.es
Fri Dec 30 01:20:35 PST 2016


Sorry! I realized that I created the color key through the "Surface 
color" tool.

So, by default there is no color key. I think now this is not doable 
unless I set the color key in the script.


On 30/12/16 09:21, Pablo Conesa wrote:
> Dear all
>
> We have this simple script to open a volume (#0) coloured using values 
> from a second volume (#1):
>
>
> open betaGal.mrc
> open extra/MG_Chimera_resolution.vol
> volume #1 voxelSize 3.54
> vol #1 hide
> scolor #0 volume #1 cmap rainbow reverseColors True
>
>
> For scolor command we are using a volume.
> https://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/scolor.html#volume
>
> It would be nice to achieve something like this at start up (note the 
> color key is based on the volume):
>
>
> I've did it dragging the mouse over the canvas while "Color key" 
> utility is open.
>
> And, is there a posibility to round up the values. Some kind of:
> Psaudocode:
> Give the resulting color key
> for each round values
> display the color key
>
> I guess that if there is a way to get the color key, then rest can be 
> done through commands.
>
> Cheers, Pablo.
>
>
>
> _______________________________________________
> Chimera-users mailing list: Chimera-users at cgl.ucsf.edu
> Manage subscription: http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20161230/cf7adf55/attachment-0001.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: not available
Type: image/png
Size: 218789 bytes
Desc: not available
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20161230/cf7adf55/attachment-0001.png>


More information about the Chimera-users mailing list