[Chimera-users] output hdf5

gijs gijsschot at gmail.com
Mon Oct 12 19:26:53 PDT 2015

Dear Sir/Madam.

First of all I want to complement the chimera team for writing a fantastic package for view macromolecular complexes. 

I am a researcher from the coherent X-ray diffraction community and we are also producing 3D models using our software [1]. However, we write data in a hdf5 format. Would you be interested to incorporate our file system into your package, or, and I think this is for now the better solution, could you provide a way I can write my hdf5 file to a chimera readable format and visa versa? For instance, I am trying to open a .map file from the EM databank, but do not know to exactly how to convert it. Are there tools? What file tree in hdf5 do I need?

With kind regards,
Gijs van der Schot

[1]  http://journals.aps.org/prl/abstract/10.1103/PhysRevLett.114.098102

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