[Chimera-users] Contour levels

Tom Goddard goddard at sonic.net
Fri Mar 20 09:30:20 PDT 2015


Hi Nick,

  The option is “use only data above contour level from *first* map”.  So the correlation should change if you adjust the contour of map #1 when fitting #1 in #2, but it will not change when the contour level of map #2 is changed.

	Tom


> On Mar 20, 2015, at 7:46 AM, Nicholas Michelarakis wrote:
> 
> Hello all,
> 
> Forgive me if this is a silly question but I was under the impression that when you opened two density maps in volume viewer and used the Fit in Map tool, with the Use only data above contour level option ticked, the correlation would change according to the contour level you selected in the volume viewer. In my case this does not happen.
> 
> If this is indeed a bug, I would be happy to provide further information. Atm, I'm using Chimera 1.10.
> 
> Thank you very much in advance.
> 
> Best,
> Nick    
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