[Chimera-users] CHIMERA movie with parm7/dcd

Eric Pettersen pett at cgl.ucsf.edu
Mon Feb 9 11:09:07 PST 2015


Hi Francesco,
	I think you've dome this before.  If you are using a prmtop/DCD combo you need to choose the "NAMD (prmtop/DCD)" format, not the "Amber" format.  Maybe you should note this down somewhere. :-)

--Eric

                        Eric Pettersen
                        UCSF Computer Graphics Lab
                        http://www.cgl.ucsf.edu

On Feb 9, 2015, at 12:15 AM, Francesco Pietra <chiendarret at gmail.com> wrote:

> Hello:
> In the recent past, issues in running movie with parm7 files were solved. Now, with ambertools14 problems come out again, unless I dropped into a silly mistake.
> 
> That is, parm7/dcd was refused because no top file was found. Renaming the prm7 extension prmtop led to
> 
> 
> File "/opt/UCSF/Chimera64-1.7/share/Trajectory/formats/Amber/Amber.py", line 354, in SetupFrame
>     raise IOError, "Trajectory/Restart header line is greater than 80 characters -- invalid!!"
> 
> Thanks for your kind attention
> 
> francesco pietra
> 
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