[Chimera-users] Coloring an specific area along a morphing serie among several maps

Ana Lucia Alvarez Cabrera anlualca at yahoo.com
Tue Aug 4 00:54:06 PDT 2015

Dear Srs,

I made a chimera movie where six different conformations of the same complex are morphed in a sequence, changing on to the next one (the aim is  showing a conformational change occurring in a number of steps, in this case the six electron microscopy maps).  My complex has an specially flexible domain   and  I need to highlight this area along the morphing sequence of the six maps. I suppose that this can be done using the markers and color zone options, but I don't  know how to implement this orders in the .cmd script of my movie.  Thanks in advance for your help.


Ana Lucia Alvarez Cabrera
Unidad de Bioinformática. Lab. B-13
Dept. Estructura de Macromoléculas
Centro Nacional de Biotecnología (CSIC)
C/ Darwin 3, Campus de Cantoblanco
28049, Madrid, España
Tel: (34) 915854510

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