[Chimera-users] Morphing a residue through MD trajectories

George Tzotzos gtzotzos at me.com
Sat Aug 1 07:25:53 PDT 2015


Hi,

I have an MD trajectory which I can load successfully on Chimera. My objective is to monitor changes in conformations of one particular residue in the receptor (:123) throughout the trajectory and generate a movie. If I could do this in tandem with a bound ligand so much the better.

I’ve tried to follow the instructions but obviously, I get it wrong.

I opened the Morph Conformations tool, I selected the trajectory and clicked on Add. This generated a 2nd MD Movie panel of just one frame. 

Any help would be most welcome

Regards

George




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