[Chimera-users] how to get multi contour lines?

Fan, Guizhen Guizhen.Fan at uth.tmc.edu
Wed Nov 5 10:51:54 PST 2014


Thank you.

Maybe they used different software.


On Nov 5, 2014, at 12:36 PM, Elaine Meng <meng at cgl.ucsf.edu<mailto:meng at cgl.ucsf.edu>> wrote:

Hi Guizhen,
I don’t know of a way to make a figure exactly like yours, with colors between black lines.  However, I know how to show a slice in which the contour lines themselves are colored, as in the attached image.  To make that image, I used the “Planes” feature in Volume Viewer, with multiple contour levels and other specific settings as described in this previous post:

<http://plato.cgl.ucsf.edu/pipermail/chimera-users/2010-August/005454.html<https://urldefense.proofpoint.com/v2/url?u=http-3A__plato.cgl.ucsf.edu_pipermail_chimera-2Dusers_2010-2DAugust_005454.html&d=AAMF-g&c=6vgNTiRn9_pqCD9hKx9JgXN1VapJQ8JVoF8oWH1AgfQ&r=vvWfCerKgBcFT5AiEGZk8dfN4IREth33--_K4BUjb1M&m=nxXHRo0BUosOoN0xJ92yQJpH41r8ugPxB0NJ7Y9F6Jk&s=j881gpx43i3go7IJSXGfnYtRJByzJLQSLD7xYdhJZIo&e=>>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

<contourlines.png>
On Nov 5, 2014, at 7:41 AM, Fan, Guizhen <Guizhen.Fan at uth.tmc.edu<https://urldefense.proofpoint.com/v2/url?u=http-3A__mailto-3AGuizhen.Fan-40uth.tmc.edu&d=AAMF-g&c=6vgNTiRn9_pqCD9hKx9JgXN1VapJQ8JVoF8oWH1AgfQ&r=vvWfCerKgBcFT5AiEGZk8dfN4IREth33--_K4BUjb1M&m=nxXHRo0BUosOoN0xJ92yQJpH41r8ugPxB0NJ7Y9F6Jk&s=hhNOrPZvx56riIyipS2_YieX9Nq43ucg35odtQB4unc&e=>> wrote:

Hi,
How can I get multi contour lines like attached figure?
Thank you.
Guizhen






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