[Chimera-users] : )

Elaine Meng meng at cgl.ucsf.edu
Tue May 13 13:32:01 PDT 2014


Hi J,
Yes, as I tried to explain in my previous message, "outside sources" = "other databases":

> No -- if I understand correctly, the CDD has sequence alignments imported from outside sources (other databases) as well as human-curated alignments. 

I came to this conclusion by looking at the paper that describes CDD.  You may want to take a look at this paper and/or information at the CDD website:
<http://nar.oxfordjournals.org/content/41/D1/D348>
<http://www.ncbi.nlm.nih.gov/Structure/cdd/cdd.shtml>

Best,
Elaine
----------
Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On May 13, 2014, at 11:22 AM, ce <allderann at gmail.com> wrote:

> Thanks for superimposing instruction.
> Can You clarify the meaning of the outside sources ?
> Kind regards,
> J.




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