[Chimera-users] surface failures

Elaine Meng meng at cgl.ucsf.edu
Thu Mar 6 10:20:22 PST 2014


Dear Julian,
The surface failure is a numerical thing that may differ on different machines, and there is not a consistent recipe for how to solve the problem.  Please see this page on possible solutions, including showing some alternative types of surface instead of a "molecular" surface:

<http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/surfprobs.html>

I hope this helps,
Elaine
----------
Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Mar 4, 2014, at 3:31 AM, Julian Marzi <julian.marzi at googlemail.com> wrote:

> Dear Chimera,
> I try to show the surface of the 60S in yeast (PDB: 3O5H), but it doesn't work. Mscalc returned code 11 is shown. If I split the 60S every chain show the surface except the first strain (25S). How can I show the surface from the first chain?
> Thank you very much
> Best regards
> Julian Marzi




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