[Chimera-users] Add reasonable bonds from command line

Enrico Ronca enrico at thch.unipg.it
Sun Dec 28 02:09:18 PST 2014

Dear Sir.

I'm Enrico Ronca a post-doc researcher at the National Research Council of
Italy in Perugia.

I'm contacting you because I often work with metal atoms and not always
chimera show me bonds.
I solved the problem removing all bonds and pseudo bonds and adding
"reasonable bond between selected atoms" in the adjust bonds menu of

Is there a way to run the same procedure from the command line so that I
could automate it by a script?

Thank you in advance for your reply.

I'm looking forward to hearing from you

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