[Chimera-users] Create a protein model using Chimera?

Maja Divjak divjak.m at wehi.EDU.AU
Wed Oct 16 00:04:15 PDT 2013


Hello Chimera,

I have looked high and low for the propeptide domain of IL-1 beta, but it does not exist as a PDB. I was therefore wondering what is the best approach to generating a 3d structure for the propeptide domain using the protein sequence and Chimera? If you could please outline a possible process, I would very much appreciate it. I see you have tutorials for comparative modeling, but in this case there is nothing to compare it to except other homologous sequences from the IL-1 family. 

I look forward to your reply!

Thank you and best wishes,

Dr Maja Divjak,
WEHI, Melbourne, Australia

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