[Chimera-users] molmap and origin index

Catalin Buiu cbuiu at yahoo.com
Mon Jul 8 13:08:57 PDT 2013

Hello all,

I have the following problem: when I use molmap to generate 
a map from an atomic structure, the result is fine: both align.
When I use another (Matlab) program to generate the map, the two,
when opened in Chimera do not align anymore.
My question is how molmap generates an origin index such that
both the map and the structure do align and how Chimera reads (and converts)
the xyz origin data from the MRC file?

Thank you.

Catalin Buiu
University of Bucharest, Romania
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