[Chimera-users] Naming chains and domains

Tom Goddard goddard at sonic.net
Wed Feb 6 10:09:54 PST 2013


Hi Rashmi,

  To name domains you can use the "namesel" (name selection) command, for example,

select #0:1-10.A
namesel domain1
color pink domain1

http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/namesel.html

   Tom



On Feb 6, 2013, at 10:03 AM, Elaine Meng wrote:

> Hi Rashmi,
> You can change the chain ID and/or renumber residues:  Chimera menu: Tools... Structure Editing... Change Chain IDs (or command "changechains"), Tools... Structure Editing... Renumber Residues (or command "resrenumber").
> 
> <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/editing/changechains.html>
> <http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/editing/renumber.html>
> 
> You can search the documentation for terms like "change chain" or "chain ID" using the Chimera menu: Help... Search Documentation. 
> Elaine
> -----
> Elaine C. Meng, Ph.D.                       
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> 
> On Feb 5, 2013, at 10:48 PM, rashmi gupta wrote:
> 
>> Sir 
>> I want to know that if i had modeled a protein structure and want to categorize it into different chain or domain then how would i do this through chimera?
>> 
>> Plz give the solution of question
> 
> 
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