[Chimera-users] morph conformation

Elaine Meng meng at cgl.ucsf.edu
Sat Apr 27 09:09:23 PDT 2013

Hi Moumita,
Although the whole morph can include several structures, each part is only between two structures.  So if your morph is A -> B -> C -> D where each letter is a structure, "morph start" should only describe part A -> B.  Then "morph interpolate" is used to describe B -> C, then again to describe C -> D.

This is described in more detail in the manual page for the "morph" command:

Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Apr 26, 2013, at 11:53 PM, Moumita Dutta wrote:

> Hello chimera-users,
> I'm trying to use the option morph conformations from the command line and cannot specify more than one molecule with the command morph start.
> How to use the morph start command for more than two molecules ?
> Thanks for any help.
> Moumita

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