[Chimera-users] Problems installing and running chimera on opensuse 12.1

Visvaldas K. coyote_v2002 at yahoo.com
Tue Nov 20 00:34:43 PST 2012


The installer woks now (as of November 19th version), thank you. Unfortunately, the atoms are not getting displayed (I get black screen). I can change the color of the background, though:)

Best regards,

Vis



________________________________
 From: Visvaldas K. <coyote_v2002 at yahoo.com>
To: "chimera-users at cgl.ucsf.edu" <chimera-users at cgl.ucsf.edu> 
Sent: Friday, November 16, 2012 1:19 PM
Subject: Re: Problems installing and running chimera on opensuse 12.1
 

Sorry, I forgot to add that bzip2 is installed (v 1.0.6), I am not sure if the right libbz2 came with it. Running the earlier version of chiemra (September 14) brings up the GUI but the loaded molecules are invisible (the screen remains black).

Vis

  




________________________________
 From: Visvaldas K. <coyote_v2002 at yahoo.com>
To: "chimera-users at cgl.ucsf.edu" <chimera-users at cgl.ucsf.edu> 
Sent: Friday, November 16, 2012 1:15 PM
Subject: Problems installing and running chimera on opensuse 12.1
 

Hi all,

I'm having problems after the opensuse (gnome desktop) upgrade to the 12.1 version. I can go on for hours how great this new gnome desktop is *NOT*, but that's not the main issue here.


During installation, the messages are as follows:

Downloads% ./chimera-alpha-linux_x86_64\(1\).bin
UnZipSFX 5.41 of 16 April 2000, by Info-ZIP (Zip-Bugs at lists.wku.edu).
Original path: '/home/visvaldas/Downloads'
  inflating: chimera_install_vautEs/installer  
  inflating: chimera_install_vautEs/chimera.bin  

Enter install location: ~/.local/UCSF-Chimera64-2012-11-14
Extracting files.  This may take a few minutes.
Executing command: './chimera.bin -q -d /home/visvaldas/.local/UCSF-Chimera64-2012-11-14'
UnZipSFX 5.52 of 28 February 2005, by Info-ZIP (http://www.info-zip.org).

Install desktop menu and icon? yesyes
Traceback (most recent call last):
  File
 "/home/visvaldas/.local/UCSF-Chimera64-2012-11-14/share/__main__.py", line 69, in <module>
    value = chimeraInit.init(sys.argv)
  File "/home/visvaldas/.local/UCSF-Chimera64-2012-11-14/share/chimeraInit.py", line 594, in init
    import chimera
  File "/home/visvaldas/.local/UCSF-Chimera64-2012-11-14/share/chimera/__init__.py", line 16, in <module>
    from _chimera import BBox, Camera, Color, ColorGroup, DirectionalLight, LODControl, Lens, LensViewer, Light, Material, MaterialColor, Model, NoGuiViewer, OGLFont, OSLAbbreviation, OpenModels, OpenState, PathFinder, PixelMap, Plane, Point, PositionalLight, Selectable, SharedState, SpotLight, Sphere, Texture, TextureColor, TrackChanges, Vector, Viewer, X3DScene, Xform
ImportError: libbz2.so.1.0: cannot open shared object file: No such file or directory
ERROR in chimera_final_install: unable to install desktop icon: 
result code from installer: 256
Installer returned unexpected return code '256'
Cleaning up extract dir, 'chimera_install_vautEs'
Installation is done; press return.

This was using the November 14 version of Chimera.

libbz2 error happens also during the run (I don't care much about icon problem).



visvaldas% ~/.local/UCSF-Chimera64-2012-11-14/bin/chimera 1HVR.pdb
Traceback (most recent call last):
  File "/home/visvaldas/.local/UCSF-Chimera64-2012-11-14/share/__main__.py", line 69, in <module>
    value = chimeraInit.init(sys.argv)
  File "/home/visvaldas/.local/UCSF-Chimera64-2012-11-14/share/chimeraInit.py", line 594, in init
    import chimera
  File
 "/home/visvaldas/.local/UCSF-Chimera64-2012-11-14/share/chimera/__init__.py", line 16, in <module>
    from _chimera import BBox, Camera, Color, ColorGroup, DirectionalLight, LODControl, Lens, LensViewer, Light, Material, MaterialColor, Model, NoGuiViewer, OGLFont, OSLAbbreviation, OpenModels, OpenState, PathFinder, PixelMap, Plane, Point, PositionalLight, Selectable, SharedState, SpotLight, Sphere, Texture, TextureColor, TrackChanges, Vector, Viewer, X3DScene, Xform
ImportError: libbz2.so.1.0: cannot open shared object file: No such file or directory

Thank you for your attention, and many thanks.

Vis
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