[Chimera-users] Question about displaying x-ray ribbon.

Jianfeng Lin jflin at brandeis.edu
Tue Dec 11 15:29:54 PST 2012


Hi Elaine,

Thank you very much!

It works! Greatly appreciate it.

Jianfeng

On Tue, Dec 11, 2012 at 5:55 PM, Elaine Meng <meng at cgl.ucsf.edu> wrote:

> Hi Jianfeng,
> You can specify width/height of ribbon using Ribbon Style Editor (in menu
> under Tools... Depiction), the Scaling section.  Optionally, you can save
> the "scaling" so it will be easy to apply the same dimensions later with
> the ribscale command. For example, if you had named your scaling "plump":
>
> ribscale plump
>
> Ribbon Style Editor:
> <
> http://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/ribbonstyle/ribbonstyle.html
> >
>
> "ribscale" command:
> <http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/ribscale.html>
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> On Dec 11, 2012, at 2:17 PM, Jianfeng Lin wrote:
>
> > Hi Chimera Team,
> > Is it possible to make the ribbon of PDB crystal structure plumper in
> Chimera. I wonder it because the ribbon of interested crystal structure
> looks slim (in flat, edged, or rounded mode), and leaves much empty space
> when I fit it into my low resolution cryo-ET volume.
> > Thank you very much in advance!
> > Jianfeng
>
>


-- 
Postdoc at Nicastro Lab
Biology Department
Brandeis University
415 South Street, Waltham, MA 02453, USA
Tel. 001-781-736-2439
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