[Chimera-users] PDB splitting

Milen Raytchev milen.raytchev at gmail.com
Wed Nov 30 06:16:08 PST 2011


Hi everyone,

First, thank you Tom for redirecting me.

I am trying to split a long single chain which is contained in a PDB
file into several shorter chains, each to be contained in individual
PDB files. I have tried Chimera (save as) and PDBEditor.jar software
to do that but each approach messes the format somehow and I cannot
use it in Chimera later (visualization suffers). Could you recommend
me a way to do this splitting properly such that the PDB format is not
messed up in the resultant 6 AAA domains and I can use the files
further in Chimera. The file is attached if of any use.

Thank you in advance and I do appreciate your help.

Sincerely,
Milen Raytchev
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