[Chimera-users] Rotation & Translation matrix to match

Elaine Meng meng at cgl.ucsf.edu
Fri Nov 18 17:01:52 PST 2011

Hi Hernando,
Maybe you are thinking of the command "measure rotation":


Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

n Nov 18, 2011, at 4:55 PM, Hernando J Sosa wrote:

> Hi
> After  using  "Matchmaker" (to align two structures) or "Fit in Map" (to align a structure to a density map) is there a way to retrieve the transformation matrix that was applied to get the match ?
> I seem to remember that this info was in the reply log window. However I don't see it after  matching two structures using Matchmaker (I see some other data regarding the matching but not the transformation matrix)
> Thanks
> Hernando

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