[Chimera-users] help with surfnet results

saumyak at ebi.ac.uk saumyak at ebi.ac.uk
Mon Oct 25 06:33:53 PDT 2010


Thanks for the reply. I was able to separate all the blobs. I have a new
query now. I am trying to retrieve the residues that surround one of the
predicted binding pockets by Surfnet. I tried the command #1: za<8.0, but
it doesn't work as it needs specification of an atom from which it will
calculate the zone. In my case, there is no small molecule that can be
used as reference. I want to select and highlight all the residues that
surround that predicted pocket. Please suggest how this can be carried


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