[Chimera-users] Per-atom RMSD

Ibrahim Moustafa I.moustafa at psu.edu
Fri Oct 8 13:52:44 PDT 2010

Dear Chimera,

I have a question regarding RMSD: I have two structures to superimpose
using certain residues; and I am interested to get the RMSD value for each
CA-atom in the structure. I wonder if there is a way to do that in Chimera?
 I think there is no direct way; but I wonder if there is a script that can
be used for that.

For the developer: It might be useful to have a tool that can directly do
that in Chimera

     Many thanks for help,


Ibrahim M. Moustafa, Ph.D.
Biochemistry and Molecular Biology Dept.
201 Althouse Lab., University Park,
Pennsylvania State University
PA 16802

Tel. (814) 863-8703
Fax (814) 865-7927

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